BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005H02SP1|AL425434
(1028 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1422 1907 0.0
>3x_Contig1422
Length = 9570
Score = 1907 bits (961), Expect = 0.0
Identities = 1023/1036 (98%), Gaps = 8/1036 (0%)
Strand = Plus / Minus
Query: 1 gatccatttcctgtagcaagtatctacggtttatatcactgcctcttggctgaacattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 gatccatttcctgtagcaagtatctacggtttatatcactgcctcttggctgaacattct 1380
Query: 61 ggtaacatcattcagctgctttacttaatcacttatacttcagaaagacttcagagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 ggtaacatcattcagctgctttacttaatcacttatacttcagaaagacttcagagagca 1320
Query: 121 gatcttcaagccaattctcct-attataggggaaaaacggagccagccatccaccttaaa 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 gatcttcaagccaattctcctcattataggggaaaaacggagccagccatccaccttaaa 1260
Query: 180 aggaaagaaaaaaaa--tatctgaaattaaatgagattcagaaagaagtatacataatat 237
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 aggaaagaaaaaaaaaatatctgaaattaaatgagattcagaaagaagtatacataatat 1200
Query: 238 cgtatttggtggaacgattacggaggtgattatatacacactaaggtgcagtgctgtcga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 cgtatttggtggaacgattacggaggtgattatatacacactaaggtgcagtgctgtcga 1140
Query: 298 agaaatattgccaaacatgtcagaagaacctgtggaccgcacgaacccagcaattgctga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 agaaatattgccaaacatgtcagaagaacctgtggaccgcacgaacccagcaattgctga 1080
Query: 358 ggaacgtgatatacaagccctagattcgaccacgactgttgatatcaatgtgaattcggt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ggaacgtgatatacaagccctagattcgaccacgactgttgatatcaatgtgaattcggt 1020
Query: 418 aaccgacgctgatgcgaacgtggagaacaacacccctgatgtgcctgatgttgatgtgac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 aaccgacgctgatgcgaacgtggagaacaacacccctgatgtgcctgatgttgatgtgac 960
Query: 478 gccatctccatcagcaaataaaactgtaa-atagtaacaccgagggagcggcccatgcta 536
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 959 gccatctccatcagcaaataaaactgtaagatagtaacaccgagggagcggcccatgcta 900
Query: 537 gaaatgcgtcaattgtatctatgaataacgcgaacattaaatcggttgttttgtttgtaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gaaatgcgtcaattgtatctatgaataacgcgaacattaaatcggttgttttgtttgtaa 840
Query: 597 aatcaacgttggaatccataatgaaatccaaagaacttaagaaacttacgagttgtcaga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 aatcaacgttggaatccataatgaaatccaaagaacttaagaaacttacgagttgtcaga 780
Query: 657 aagatatagaaaggactttgaagtccctagaacaaacctcagcagcgccaaccggaactt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aagatatagaaaggactttgaagtccctagaacaaacctcagcagcgccaaccggaactt 720
Query: 717 cggtagaaattgactcgttgctcgtttttgaagcgttaagatcatgttgcagatctaaga 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cggtagaaattgactcgttgctcgtttttgaagcgttaagatcatgttgcagatctaaga 660
Query: 777 tcattgatattcaaataaaggctttagattgtttcgctaaactgttctcctttcaagcct 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tcattgatattcaaataaaggctttagattgtttcgctaaactgttctcctttcaagcct 600
Query: 837 tggacgaatcgctgctagtgaatcctccagactcaatggcttcaaacgatcagaaccctg 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tggacgaatcgctgctagtgaatcctccagactcaatggcttcaaacgatcagaaccctg 540
Query: 897 aaaatattggaattactccacctccaaaacaaaagcttattgatgcggkaattgacacaa 956
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 539 aaaatattggaattactccacctccaaaacaaaagcttattgatgcggtaattgacacaa 480
Query: 957 tttgtgattgttttgaagggg-aaatacagactc-agaggtggactgc-agttgtacgtg 1013
||||||||||||||||||||| |||||||||||| |||| | ||||| |||||||||||
Sbjct: 479 tttgtgattgttttgaaggggaaaatacagactcaagagtggaactgcaagttgtacgtg 420
Query: 1014 gkttag-cagttgtat 1028
| |||| |||||||||
Sbjct: 419 gtttagccagttgtat 404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7835
Number of Sequences: 1807
Number of extensions: 7835
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1028
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1012
effective length of database: 10,329,639
effective search space: 10453594668
effective search space used: 10453594668
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)